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Publications:

Publications 2001 - 2008 gained about 1600 citations
over 1300 citations with IIMCB affiliation (2003-2008)
The current citation rate is 30 per month

10 publications cited 50 times or more
16 publications cited 30 times or more are marked

1. M. Kolinski, S. Filipek, "Molecular Dynamics of mu Opioid Receptor Complexes with Agonists and Antagonists",
   (2008) The Open Struct. Biol. J., 2, 8-20.

2. R. Stephen, S. Filipek, K. Palczewski, M.C. Sousa, "Ca(2+)-dependent Regulation of Phototransduction",
   (2008) Photochem. Photobiol., 84, 903-910.

3. A.M. Kannan, V. Renugopalakrishnan, S. Filipek, P. Li, G.F. Audette, L. Munukutla, "Bio-Batteries and Bio Fuel Cells: Leveraging on Electronic Charge Transfer Proteins",
   (2008) J. Nanosci. Nanotechno., accepted.

4. V. Thavasi, T. Lazarova, S. Filipek, M. Kolinski, E. Querol, A. Kumar, S. Ramakrishna, E. Padros, V. Renugopalakrishnan, "Study on the Feasibility of Bacteriorhodopsin as Bio-Photosensitizer in Excitonic Solar Cell: A First Report",
   (2008) J. Nanosci. Nanotechno., accepted.

5. T. Majewski, S. Lee, J. Jeong, D.S. Yoon, A. Kram, M.S. Kim, T. Tuziak, J. Bondaruk, S. Lee, W.S. Park, K.S. Tang, W. Chung, L. Shen, S.S. Ahmed, D.A. Johnston, H.B. Grossman, J.H. Zhou, R.A. Harris, C. Snyder, S. Filipek, S.A. Narod, P. Watson, H.T. Lynch, A. Gazdar, K. Baggerly, J.P. Issa, W.F. Benedict, S.E. Scherer, B. Czerniak, "Understanding the Development of Human Bladder Cancer By Using a Whole-Organ Genomic Mapping Strategy",
   (2008) Lab. Invest., 88, 694-721.

6. K. Jozwiak, K.A. Krzysko, L. Bojarski, M. Gacia, S. Filipek, "Molecular models of the interface between APH-1 and presenilin involving GxxxG motifs",
   (2008) ChemMedChem, 3, 627-634.

7. M.P. Golan, M. Styczynska, K. Jozwiak, J. Walecki, A. Maruszak, J. Pniewski, R. Lugiewicz, S. Filipek, M. Barcikowska, C. Zekanowski, "Early-onset Alzheimer's disease with a de novo mutation in the presenilin 1 gene",
   (2007) Exp. Neurol., 208, 264-268

8. S. Lee, J. Jeong, T. Majewski, S.E. Scherer, M.S. Kim, T. Tuziak, K.S. Tang, K. Baggerly, H.B. Grossman, J.H. Zhou, L. Shen, J. Bondaruk, S.S. Ahmed, S. Samanta, P. Spiess, X. Wu, S. Filipek, D. McConkey, M. Bar-Eli, J.P. Issa, W.F. Benedict, B. Czerniak, "Forerunner genes contiguous to RB1 contribute to the development of in situ neoplasia",
   (2007) Proc. Natl. Acad. Sci. USA, 104, 13732-13737.

9. K.A. Krzysko, M. Kolinski, S. Filipek, "Molecular modelling of the complex of oligomeric rhodopsin and its G protein",
   (2007) J. Phys.: Condens. Matter, 19, 285204.

10. P.S.H. Park, K.T. Sapra, M. Kolinski, S. Filipek, K. Palczewski, D.J. Muller, "Stabilizing effect of Zn²⁺ in native bovine rhodopsin",
    (2007) J. Biol. Chem., 282, 11377-11385.

11. S. Filipek, A. Modzelewska, K.A. Krzysko, chapter "Dimerization and oligomerization of rhodopsin and other G protein-coupled receptors" in "Molecular Materials with Specific Interactions: Modeling and Design",
    W.A. Sokalski ed., Springer 2007, pp. 453-467.

12. K. Jozwiak, C. Zekanowski, S. Filipek, "Linear patterns of Alzheimer's disease mutations along alpha-helices of presenilins as a tool for PS-1 model construction",
    (2006) J. Neurochem., 98, 1560-1572.

13. M. Cieplak, S. Filipek, H. Janovjak, K.A. Krzysko, "Pulling single bacteriorhodopsins out of a membrane: comparison of simulation and experiment",
    (2006) Biochim. Biophys. Acta - Biomembranes, 1758, 537-544.

14. L. Zhu, Y. Imanishi, S. Filipek, A. Alekseev, B. Jastrzebska, W. Sun, D.A. Saperstein, K. Palczewski, "Autosomal recessive retinitis pigmentosa: E150K mutation in the opsin gene",
    (2006) J. Biol. Chem., 281, 22289-22298.

15. K.T. Sapra, P.S.-H. Park, S. Filipek, A. Engel, D.J. Muller, K. Palczewski, "Detecting molecular interactions that stabilize native bovine rhodopsin",
    (2006) J. Mol. Biol., 358, 255-269.

16. C. Zekanowski, M.P. Golan, K.A. Krzysko, D. Religa, W. Lipczynska-Lojkowska, S. Filipek, A. Kowalska, G. Rossa, B. Peplonska, M. Styczynska, A. Maruszak, M. Wender, J. Kulczycki, M. Barcikowska, J. Kuznicki, "Two novel presenilin-1 gene mutations connected with frontotemporal dementia-like phenotype: genetic and bioinformatic assessment",
    (2006) Exp. Neurol., 200, 82-88.

17. A. Modzelewska, S. Filipek, K. Palczewski, P.S.-H. Park, "Arrestin interaction with rhodopsin: conceptual models",
    (2006) Cell Biochem. Biophys., 46, 1-15.

18. S. Filipek, A. Modzelewska, chapter "Molecular Modelling of Membrane Proteins", in "Structural Genomics on Membrane Proteins",
    K.H. Lundstrom ed., Taylor and Francis, New York, 2006, pp. 331-348.

19. J.S. Jaworski, M. Cembor, M. Kolinski, "Electrostatic model of bond dissociation energies in polyhalogen methanes",
    (2006) J. Phys. Org. Chem., 19, 276-280.

20. S. Filipek, A. Modzelewska, K.A. Krzysko, "Functional Oligomers of Rhodopsin - a G Protein-Coupled Receptor Template", in "Joint Meeting on Medicinal Chemistry, Vienna (Austria) June 20-23, 2005",
    P. Ettmayer, G. Ecker eds., Medimond International Proceedings, Bologna, Italy, 2005, pp. 5-10.

21. S. Filipek, "Organization of rhodopsin molecules in native membranes of rod cells - old theoretical model compa#ac1310 to new experimental data",
    (2005) J. Mol. Model., 11, 385-391.

22. I. Sokal, W.J. Dupps, M.A. Grassi, J. Brown, Jr., L.M. Affatigato, N. Roychowdhury, L. Yang, S. Filipek, K. Palczewski, E.M. Stone, W. Baehr, "A Novel GCAP1 Missense Mutation (L151F) in a Large Family with Autosomal Dominant Cone-Rod Dystrophy (adCORD)",
    (2005) Invest. Ophth. Vis. Sci., 46, 1124-1132.

23. P.S.H. Park, S. Filipek, J.W. Wells, K. Palczewski, "Oligomerization of G protein-coupled receptors: past, present, and future",
    (2004) Biochemistry, 43, 15643-15656.
    (80 or more citations)

24. D. Fotiadis, Y. Liang, S. Filipek, D.A. Saperstein, A. Engel, K. Palczewski, "The G protein-coupled receptor rhodopsin in the native membrane",
    (2004) FEBS Lett., 564, 281-288.
    (80 or more citations)

25. S. Filipek, K.A. Krzysko, D. Fotiadis, Y. Liang, D.A. Saperstein, A. Engel, K. Palczewski, "A concept for G protein activation by G protein-coupled receptor dimers: the transducin/ rhodopsin interface",
    (2004) Photochem. Photobiol. Sci., 3, 628-638.
    (80 or more citations)

26. B. Jastrzebska, T. Maeda, L. Zhu, D. Fotiadis, S. Filipek, A. Engel, R.E. Stenkamp, K. Palczewski, "Functional characterization of rhodopsin monomers and dimers in detergents",
    (2004) J. Biol. Chem., 279, 54663-54675.
    (40 or more citations)

27. L. Zhu, G.F. Jang, B. Jastrzebska, S. Filipek, S.E. Pearce-Kelling, G.D. Aguirre, R.E. Stenkamp, G.M. Acland, K. Palczewski, "Naturally occurring mutation of the opsin gene (T4R) in dogs affects glycosylation and stability of the G protein-coupled receptor",
    (2004) J. Biol. Chem., 279, 53828-53839.

28. Y. Liang, D. Fotiadis, T. Maeda, A. Maeda, A. Modzelewska, S. Filipek, D.A. Saperstein, A. Engel, K. Palczewski, "Rhodopsin signaling and organization in heterozygote rhodopsin knockout mice",
    (2004) J. Biol. Chem., 279, 48189-48196.

29. K. Suda, S. Filipek, K. Palczewski, A. Engel, D. Fotiadis, "The supramolecular structure of the GPCR rhodopsin in solution and native disc membranes",
    (2004) Mol. Membr. Biol., 21, 435-446.

30. C. Zekanowski, D. Religa, C. Graff, S. Filipek, J. Kuznicki, "Genetic aspects of Alzheimer's disease",
    (2004) Acta Neurobiol. Exp., 64, 19-31.

31. Y. Imanishi, L. Yang, I. Sokal, S. Filipek, K. Palczewski, W. Baehr, "Diversity of Guanylate Cyclase-Activating Proteins (GCAPS) in Teleost Fish: Characterization of Three Novel GCAPs (GCAP4, GCAP5, GCAP7 ) from Zebrafish (Danio Rerio) and P#ac1310iction of Eight GCAPs (GCAP1-8) in Pufferfish (Fugu Rubripes)",
    (2004) J. Mol. Evol., 59, 204-217.

32. D. Fotiadis, Y. Liang, S. Filipek, D.A. Saperstein, A. Engel, K. Palczewski, "Is rhodopsin dimeric in native rods? Reply",
    (2003) Nature, 426, 31-31.

33. D. Fotiadis, Y. Liang, S. Filipek, D.A. Saperstein, A. Engel, K. Palczewski, "Atomic-force microscopy: Rhodopsin dimers in native disc membranes",
    (2003) Nature, 421, 127-128.
    (220 or more citations)

34. Y. Liang, D. Fotiadis, S. Filipek, D.A. Saperstein, K. Palczewski, A. Engel, "Organization of the G Protein-coupled Receptors Rhodopsin and Opsin in Native Membranes",
    (2003) J. Biol. Chem., 278, 21655-21662.
    (230 or more citations)

35. T. Mirzadegan, G. Benko, S. Filipek, K. Palczewski, "Sequence Analyses of G-Protein-Coupled Receptors: Similarities to Rhodopsin",
    (2003) Biochemistry-US, 42, 2759-2767.
    (110 or more citations)

36. N.M. Syed, V. Kuksa, Y. Imanishi, L. Zhu, S. Filipek, K. Palczewski, S. Kaushal, "Pharmacological Chaperone-mediated in Vivo Folding and Stabilization of the P23H-opsin Mutant Associated with Autosomal Dominant Retinitis Pigmentosa",
    (2003) J. Biol. Chem., 278, 14442-14450.
    (40 or more citations)

37. S. Filipek, D.C. Teller, K. Palczewski, R. Stenkamp, "The Crystallographic Model of Rhodopsin and Its Use in Studies of Other G Protein-Coupled Receptors",
    (2003) Annu. Rev. Biophys. Biomol. Struct., 32, 375-397.
    (60 or more citations)

38. S. Filipek, R.E. Stenkamp, D.C. Teller, K. Palczewski, "G Protein-Coupled Receptor Rhodopsin: A Prospectus",
    (2003) Annu. Rev. Physiol., 65, 851-879.
    (80 or more citations)

39. O. Fritze, S. Filipek, V. Kuksa, K. Palczewski, K.P. Hofmann, O.P. Ernst, "The Role of Conserved NPXXY(X)_5,6F Motif in The Rhodopsin Ground State and During Activation",
    (2003) Proc. Natl. Acad. Sci. USA, 100, 2290-2295.
    (90 or more citations)

40. S.A. Schadel, M. Heck, D. Maretzki, S. Filipek, D.C. Teller, K. Palczewski, K.P. Hofmann, "Ligand Channeling within a G-protein-coupled Receptor: The Entry and Exit of Retinals in Native Opsin",
    J. Biol. Chem. (2003) 278, 24896-24903.
    (30 or more citations)

41. T. Maeda, J.P. van Hooser, C.A.G.G. Driessen, S. Filipek, J.J.M. Janssen, K. Palczewski, "Evaluation of the Role of the Retinal G-Protein-Coupled Receptor (RGR) in the Vertebrate Retina in Vivo",
    (2003) J. Neurochem., 85, 944-956.
    (30 or more citations)

42. V. Kuksa, F. Bartl, T. Maeda, G.F. Jang, E. Ritter, M. Heck, J.P. Van Hooser, Y. Liang, S. Filipek, MH. Gelb, K.P. Hofmann, K. Palczewski, "Biochemical and Physiological Properties of Rhodopsin Regenerated with 11-cis-6-Ring- and 7-Ring-retinals",
    (2002) J. Biol. Chem., 277, 42315-42324.

43. R.E. Stenkamp, S. Filipek, C.A.G.G. Driessen, D.C. Teller, K. Palczewski, "Crystal Structure of Rhodopsin: A Template for Cone Visual Pigments and Other G Protein-Coupled Receptors",
    (2002) Biochim. Biophys. Acta - Biomembranes, 1565, 168-182.
    (40 or more citations)

44. F. Haeseleer, Y. Imanishi, I. Sokal, S. Filipek, K. Palczewski, "Calcium-Binding Proteins: Intracellular Sensors from the Calmodulin Superfamily",
    (2002) Biochem. Biophys. Res. Commun., 290, 615-623.
    (50 or more citations)

45. G.-F. Jang, V. Kuksa, S. Filipek, F. Bartl, E. Ritter, M.H. Gelb, K.P. Hofmann, K. Palczewski, "Mechanism of Rhodopsin Activation as Examined with Ring Constrained Retinal Analogs and the Crystal Structure of the Ground State Protein",
    (2001) J. Biol. Chem., 276(28), 26148-26153.
    (30 or more citations)

46. I. Sokal, N. Li, C.S. Klug, S. Filipek, W.L. Hubbell, W. Baehr, K. Palczewski, "Calcium-sensitive Regions of GCAP1 as Observed by Chemical Modifications, Fluorescence, and EPR Spectroscopies",
    (2001) J. Biol. Chem., 276(46), 43361-43373.

47. A. Bronowska, A. Les, Z. Chilmonczyk, S. Filipek, O. Edvardsen, R. Ostensen, I. Sylte, "Molecular Dynamics of Buspirone Analogues Interacting with the 5-HT_1A and 5-HT_2A Serotonin Receptors",
    (2001) Bioorg. Med. Chem., 9(4), 881-895.

48. Z. Chilmonczyk, D. Siluk, R. Kaliszan, B. Lozowicka, J. Poplawski, S. Filipek, "New chemical structures of hypolipidemic and antiplatelet activity",
    (2001) Pure Appl. Chem., 73(9), 1445-1458.

49. S. Filipek, K. Krzysko, M.K. Kalinowski, "The Influence of Structural Effects on the Complexing Ability of Crown Ethers. III. Rubidium Complexes Formed by the Ligands of 18C6 Type",
    (2001) Polish J. Chem., 75, 1887-1893.

updated: September 2008