All publications
2013
Cross-linked glucose oxidase clusters for biofuel cell anode catalysts
Dudzik J, Chang WC, Kannan AM, Filipek S, Viswanathan S, Li P, Renugopalakrishnan V, Audette GF
Biofabrication. 2013
Enhancing the production of galacto-oligosaccharides by mutagenesis of Sulfolobus solfataricus β-galactosidase
Wu Y, Yuan S, Chen S, Wu D, Chen J, Wu J
Food Chem. 2013
Low-temperature molecular dynamics simulations of horse heart cytochrome c and comparison with inelastic neutron scattering data
Pulawski W, Filipek S, Zwolinska A, Debinski A, Krzysko K, Garduño-Juárez R, Viswanathan S, Renugopalakrishnan V
Eur Biophys J. 2013
Towards Improved Quality of GPCR Models by Usage of Multiple Templates and Profile-Profile Comparison
Latek D, Pasznik P, Carlomagno T, Filipek S
PLoS One. 2013
2012
Ubiquitous amyloids
Pulawski W, Ghoshdastider U, Andrisano V, Filipek S
Appl Biochem Biotechnol. 2012
Amyloid β-Peptide 25-35 Self-Assembly and Its Inhibition: A Model Undecapeptide System to Gain Atomistic and Secondary Structure Details of the Alzheimer's Disease Process and Treatment
Naldi M, Fiori J, Pistolozzi M, Drake AF, Bertucci C, Wu R, Mlynarczyk K, Filipek S, De Simone A, Andrisano V
ACS Chem Neurosci. 2012
The Role of Water in Activation Mechanism of Human N-Formyl Peptide Receptor 1 (FPR1) Based on Molecular Dynamics Simulations
Yuan S, Ghoshdastider U, Trzaskowski B, Latek D, Debinski A, Pulawski W, Wu R, Gerke V, Filipek S
PLoS One. 2012
Action of Molecular Switches in GPCRs - Theoretical and Experimental Studies
Trzaskowski B, Latek D, Yuan S, Ghoshdastider U, Debinski A, Filipek S
Curr Med Chem. 2012
2011
Modeling of ligand binding to G protein coupled receptors: cannabinoid CB(1), CB (2) and adrenergic β (2)AR.
Latek D, Kolinski M, Ghoshdastider U, Debinski A, Bombolewski R, Plazinska A, Jozwiak K, Filipek S.
Materials Today. 2011
Arginine interactions with anatase TiO(2) (100) surface and the perturbation of (49)Ti NMR chemical shifts - a DFT investigation: relevance to Renu-Seeram bio solar cell
Koch R, Lipton AS, Filipek S, Renugopalakrishnan V
J Mol Model. 2011
2010
Study of a structurally similar kappa opioid receptor agonist and antagonist pair by molecular dynamics simulations.
Kolinski M, Filipek S
J Mol Model. 2010
Mutations that increase both Hsp90 ATPase activity in vitro and Hsp90 drug resistance in vivo.
Zurawska A, Urbanski J, Matuliene J, Baraniak J, Klejman MP, Filipek S, Matulis D, Bieganowski P
Biochim Biophys Acta. 2010
2009
Studies of the Activation Steps Concurrent to Ligand Binding in δOR and κOR Opioid Receptors Based on Molecular Dynamics Simulations
M. Kolinfski, S. Filipek
TOSBJ. 2009
CacyBP/SIP binds ERK1/2 and affects transcriptional activity of Elk-1
Kilanczyk E, Filipek S, Jastrzebska B, Filipek A
Biochem Biophys Res Commun. 2009
Generation and characterization of a novel, permanently active S100P mutant.
Austermann J, Nazmi AR, Heil A, Fritz G, Kolinski M, Filipek S, Gerke V
Biochim Biophys Acta. 2009
Study on the feasibility of bacteriorhodopsin as bio-photosensitizer in excitonic solar cell: a first report.
Thavasi V, Lazarova T, Filipek S, Kolinski M, Querol E, Kumar A, Ramakrishna S, Padrós E, Renugopalakrishnan V
J Nanosci Nanotechnol. 2009
Bio-batteries and bio-fuel cells: leveraging on electronic charge transfer proteins.
Kannan AM, Renugopalakrishnan V, Filipek S, Li P, Audette GF, Munukutla L
J Nanosci Nanotechnol. 2009
“Nanomaterials for Energy Convertion Applications”
V. Renugopalakrishnan, A. M. Kannan, S. Srinivasan, V. Thavasi, S. Ramakrishna, P. Li, A. Mershin, S. Filipek, A. Kumar, J. Dutta, A. Jaya, L. Munukutla, S. Velumani, G. F. Audette
\"Nanomaterials for Energy Storage Applications\". 2009
Modulation of molecular interactions and function by rhodopsin palmitylation
Park PS, Sapra KT, Jastrzebska B, Maeda T, Maeda A, Pulawski W, Kono M, Lem J, Crouch RK, Filipek S, Müller DJ, Palczewski K
Biochemistry. 2009
Properties of Radical Anions of Triptindanones and Indanones: Electronic Communication and Stability of Ion Pairs Containing Lithium Cations
J.S. Jaworski, A. Kosson, S. Filipek, M. Kolinski, D. Kuck
J. Phys. Chem. C. 2009
2008
Molecular dynamics of mu opioid receptor complexes with agonists and antagonists
Kolinski M, Filipek S.
The Open Struct. Biol. J.. 2008
Molecular models of the interface between anterior pharynx-defective protein 1 (APH-1) and presenilin involving GxxxG motifs
Jozwiak K, Krzysko KA, Bojarski L, Gacia M, Filipek S
ChemMedChem. 2008
Determination and modelling of stereoselective interactions of ligands with drug transporters: a key dimension in the understanding of drug disposition
Bhatia P, Kolinski M, Moaddel R, Jozwiak K, Wainer IW
Xenobiotica. 2008
Ca2+ -dependent regulation of phototransduction.
Stephen R, Filipek S, Palczewski K, Sousa MC
Photochem Photobiol. 2008
Understanding the development of human bladder cancer by using a whole-organ genomic mapping strategy.
Majewski T, Lee S, Jeong J, Yoon DS, Kram A, Kim MS, Tuziak T, Bondaruk J, Lee S, Park WS, Tang KS, Chung W, Shen L, Ahmed SS, Johnston DA, Grossman HB, Dinney CP, Zhou JH, Harris RA, Snyder C, Filipek S, Narod SA, Watson P, Lynch HT, Gazdar A, Bar-Eli M,
Lab Invest. 2008
2007
Early-onset Alzheimer's disease with a de novo mutation in the presenilin 1 gene
Golan MP, Styczyńska M, Jóźwiak K, Walecki J, Maruszak A, Pniewski J, Lugiewicz R, Filipek S, Zekanowski C, Barcikowska M
Exp Neurol. 2007
Molecular modelling of the complex of oligomeric rhodopsin and its G protein.
Krzysko KA, Kolinski M, Filipek S.
J Phys Condens Matter. 2007
Forerunner genes contiguous to RB1 contribute to the development of in situ neoplasia.
Lee S, Jeong J, Majewski T, Scherer SE, Kim MS, Tuziak T, Tang KS, Baggerly K, Grossman HB, Zhou JH, Shen L, Bondaruk J, Ahmed SS, Samanta S, Spiess P, Wu X, Filipek S, McConkey D, Bar-Eli M, Issa JP, Benedict WF, Czerniak B
Proc Natl Acad Sci U S A. 2007
Stabilizing effect of Zn2+ in native bovine rhodopsin
Park PS, Sapra KT, Koliński M, Filipek S, Palczewski K, Muller DJ
J Biol Chem. 2007
2006
Pulling single bacteriorhodopsin out of a membrane: Comparison of simulation and experiment.
Cieplak M, Filipek S, Janovjak H, Krzyśko KA
Biochim Biophys Acta. 2006
Linear patterns of Alzheimer's disease mutations along alpha-helices of presenilins as a tool for PS-1 model construction
Jozwiak K, Zekanowski C, Filipek S
J Neurochem. 2006
Arrestin interaction with rhodopsin: conceptual models.
Modzelewska A, Filipek S, Palczewski K, Park PS
Cell Biochem Biophys. 2006
Detecting molecular interactions that stabilize native bovine rhodopsin
Tanuj Sapra K, Park PS, Filipek S, Engel A, Müller DJ, Palczewski K
J Mol Biol. 2006
Two novel presenilin 1 gene mutations connected with frontotemporal dementia-like clinical phenotype: genetic and bioinformatic assessment.
Zekanowski C, Golan MP, Krzyśko KA, Lipczyńska-Łojkowska W, Filipek S, Kowalska A, Rossa G, Pepłońska B, Styczyńska M, Maruszak A, Religa D, Wender M, Kulczycki J, Barcikowska M, Kuźnicki J.
Exp Neurol.. 2006
Autosomal recessive retinitis pigmentosa and E150K mutation in the opsin gene.
Zhu L, Imanishi Y, Filipek S, Alekseev A, Jastrzebska B, Sun W, Saperstein DA, Palczewski K
J Biol Chem. 2006
Electrostatic model of bond dissociation energies in polyhalogen methanes
Jaworski JS, Cembor M, Koliński M
J Phys Org Chem. 2006
2005
Organization of rhodopsin molecules in native membranes of rod cells--an old theoretical model compared to new experimental data.
Filipek S
J Mol Model. 2005
Functional oligomers of rhodopsin – a G protein-coupled receptor template
Filipek S, Modzelewska A, Krzysko KA
Joint Meeting on Medical Chemistry. 2005
A novel GCAP1 missense mutation (L151F) in a large family with autosomal dominant cone-rod dystrophy (adCORD)
Sokal I, Dupps WJ, Grassi MA, Brown J Jr, Affatigato LM, Roychowdhury N, Yang L, Filipek S, Palczewski K, Stone EM, Baehr W
Invest Ophthalmol Vis Sci. 2005
2004
A concept for G protein activation by G protein-coupled receptor dimers: the transducin/rhodopsin interface
Filipek S, Krzysko KA , Fotiadis D, Liang Y, Saperstein DA, Engel A, Palczewski K
Photochem Photobiol Sci. 2004
The G protein-coupled receptor rhodopsin in the native membrane
Fotiadis D, Liang Y, Filipek S, Saperstein DA, Engel A, Palczewski K
FEBS Lett. 2004
Diversity of guanylate cyclase-activating proteins (GCAPs) in teleost fish: characterization of three novel GCAPs (GCAP4, GCAP5, GCAP7) from zebrafish (Danio rerio) and prediction of eight GCAPs (GCAP1-8) in pufferfish (
Imanishi Y, Yang L, Sokal I, Filipek S, Palczewski K, Baehr W
J Mol Evol. 2004
Functional characterization of rhodopsin monomers and dimers in detergents
Jastrzebska B, Maeda T, Zhu L, Fotiadis D, Filipek S, Engel A, Stenkamp RE, Palczewski K
J Biol Chem. 2004
Rhodopsin signaling and organization in heterozygote rhodopsin knockout mice
Liang Y, Fotiadis D, Maeda T, Maeda A, Modzelewska A, Filipek S, Saperstein DA, Engel A, Palczewski K
J Biol Chem. 2004
Oligomerization of G protein-coupled receptors: past, present, and future.
Park PS, Filipek S, Wells JW, Palczewski K
Biochemistry. 2004
The supramolecular structure of the GPCR rhodopsin in solution and native disc membranes.
Suda K, Filipek S, Palczewski K, Engel A, Fotiadis D
Mol Membr Biol. 2004
A naturally occurring mutation of the opsin gene (T4R) in dogs affects glycosylation and stability of the G protein-coupled receptor.
Zhu L, Jang GF, Jastrzebska B, Filipek S, Pearce-Kelling SE, Aguirre GD, Stenkamp RE, Acland GM, Palczewski K
J Biol Chem. 2004
Genetic aspects of Alzheimer's disease
Zekanowski C, Religa D, Graff C, Filipek S, Kuźnicki J
Acta Neurobiol Exp (Wars). 2004
2003
The crystallographic model of rhodopsin and its use in studies of other G protein-coupled receptors.
Filipek S, Teller DC, Palczewski K, Stenkamp R
Annu Rev Biophys Biomol Struct. 2003
Atomic-force microscopy: Rhodopsin dimers in native disc membranes
Fotiadis D, Liang Y, Filipek S, Saperstein DA, Engel A, Palczewski K
Nature. 2003
Role of the conserved NPxxY(x)5,6F motif in the rhodopsin ground state and during activation.
Fritze O, Filipek S, Kuksa V, Palczewski K, Hofmann KP, Ernst OP
Proc Natl Acad Sci U S A. 2003
Organization of the G protein-coupled receptors rhodopsin and opsin in native membranes
Liang Y, Fotiadis D, Filipek S, Saperstein DA, Palczewski K, Engel A
J Biol Chem. 2003
Evaluation of the role of the retinal G protein-coupled receptor (RGR) in the vertebrate retina in vivo.
Maeda T, Van Hooser JP, Driessen CA, Filipek S, Janssen JJ, Palczewski K
J Neurochem. 2003
Sequence analyses of G-protein-coupled receptors: similarities to rhodopsin.
Mirzadegan T, Benkö G, Filipek S, Palczewski K
Biochemistry. 2003
Pharmacological chaperone-mediated in vivo folding and stabilization of the P23H-opsin mutant associated with autosomal dominant retinitis pigmentosa.
Noorwez SM, Kuksa V, Imanishi Y, Zhu L, Filipek S, Palczewski K, Kaushal S
J Biol Chem. 2003
Ligand channeling within a G-protein-coupled receptor. The entry and exit of retinals in native opsin.
Schadel SA, Heck M, Maretzki D, Filipek S, Teller DC, Palczewski K, Hofmann KP
J Biol Chem. 2003
2002