Preprint rDNAmine: A New Tool for the Analysis of Long Repetitive Sequences. Czarnocka-Cieciura A, Gumińska N. bioRxiv. 2026 Publication PolyA tail segmentation improves the stability of the template DNA and increases the translatability of in vitro transcribed mRNA. Spiewla T, Czubak K, Pilch Z, Baranowski MR, Krawczyk PS, Affek K, Antczak W, Szulc-Gasiorowska M, Chmielinski S, Mroczek S, Brouze M, Nowis D, Golab J, Dziembowski A, Jemielity J, Kowalska J. Nucleic Acids Res. 2026 Publication Polyadenylation landscape of in vivo long-term potentiation in the rat brain. Gumińska N, Pauzin FP, Kuźniewska B, Miłek J, Wardaszka-Pianka P, Krawczyk PS, Mroczek S, Jeleń S, Pagenhart PU, Bramham CR, Dziembowski A, Dziembowska M. RNA. 2025 Publication Excretory gland cell and NSPC genes in C. elegans: investigating their physiological roles. Mackiewicz Z, Liudkovska V, Dziembowski A. Genetics. 2025 Publication Chemical circularization of in vitro transcribed RNA for exploring circular mRNA design. Wasinska-Kalwa M, Mamot A, Czubak K, Frankowska K, Rajkiewicz AA, Spiewla T, Warminski M, Pilch Z, Szulc-Gasiorowska M, Siekan K, Dziembowski A, Nowis D, Golab J, Kowalska J, Jemielity J. Nat Commun. 2025 Publication Re-adenylation by TENT5A enhances efficacy of SARS-CoV-2 mRNA vaccines. Krawczyk PS, Mazur M, Orzeł W, Gewartowska O, Jeleń S, Antczak W, Kasztelan K, Brouze A, Matylla-Kulińska K, Gumińska N, Tarkowski B, Owczarek EP, Affek K, Turowski P, Tudek A, Sroka M, Śpiewla T, Kusio-Kobiałka M, Wesołowska A, Nowis D, Golab J, Kowalska J, Jemielity J, Dziembowski A, Mroczek S. Nature. 2025 Publication Direct profiling of non-adenosines in poly(A) tails of endogenous and therapeutic mRNAs with Ninetails. Gumińska N, Matylla-Kulińska K, Krawczyk PS, Maj M, Orzeł W, Mackiewicz Z, Brouze A, Mroczek S, Dziembowski A. Nat Commun. 2025 Publication Terminal nucleotidyltransferase Tent2 microRNA A-tailing enzyme regulates excitatory/inhibitory balance in the hippocampus. Wardaszka-Pianka P, Kuzniewska B, Guminska N, Hojka-Osinska A, Puchalska M, Milek J, Stawikowska A, Krawczyk P, Pauzin FP, Wojtowicz T, Radwanska K, Bramham CR, Dziembowski A, Dziembowska M. RNA. 2025 Publication DIS3L, cytoplasmic exosome catalytic subunit, is essential for development but not cell viability in mice. Brouze M, Szpila M, Czerwińska AM, Antczak W, Mroczek S, Kuliński T, Hojka-Osińska AM, Cysewski D, Gewartowska O, Adamska D, Gruchota J, Borsuk E, Dziembowski A. RNA. 2025 Publication Comprehensive analysis of poly(A) tails in mouse testes and ovaries using Nanopore Direct RNA Sequencing. Czarnocka-Cieciura A, Brouze M, Gumińska N, Mroczek S, Gewartowska O, Krawczyk PS, Dziembowski A. Sci Data. 2025 Publication 5′ terminal nucleotide determines the immunogenicity of IVT RNAs. Wolczyk M, Szymanski J, Trus I, Naz Z, Tame T, Bolembach A, Choudhury NR, Kasztelan K, Rappsilber J, Dziembowski A, Michlewski G. Nucleic Acids Res. 2025 Publication Zygotic activin a is dispensable for the mouse preimplantation embryo development and for the derivation and pluripotency of embryonic stem cells. Winek E, Wolińska-Nizioł L, Szczepańska K, Szpakowska A, Gewartowska O, Wysocka I, Grzesiak M, Suwińska A. Biol Reprod. 2025 Publication Ecological interactions in glacier environments: a review of studies on a model Alpine glacier. Crosta A, Valle B, Caccianiga M, Gobbi M, Ficetola FG, Pittino F, Franzetti A, Azzoni RS, Lencioni V, Senese A, Corlatti L, Buda J, Poniecka E, Novotná Jaroměřská T, Zawierucha K, Ambrosini R. Biol Rev. 2025 Publication Modeling of mRNA deadenylation rates reveal a complex relationship between mRNA deadenylation and decay. Czarnocka-Cieciura A, Poznański J, Turtola M, Tomecki R, Krawczyk PS, Mroczek S, Orzeł W, Saha U, Jensen TH, Dziembowski A, Tudek A. EMBO J. 2024 Publication Transcriptome-Wide Analysis of mRNA Adenylation Status in Yeast Using Nanopore Sequencing. Krawczyk PS, Tudek A, Mroczek S, Dziembowski A. Methods Mol Biol. 2024 Publication TENT5-mediated polyadenylation of mRNAs encoding secreted proteins is essential for gametogenesis in mice. Brouze M, Czarnocka-Cieciura A, Gewartowska O, Kusio-Kobiałka M, Jachacy K, Szpila M, Tarkowski B, Gruchota J, Krawczyk P, Mroczek S, Borsuk E, Dziembowski A. Nat Commun. 2024 Publication Structure-functional characterization of Lactococcus AbiA phage defense system. Gapińska M, Zajko W, Skowronek K, Figiel M, Krawczyk PS, Egorov AA, Dziembowski A, Johansson MJO, Nowotny M. Nucleic Acids Res. 2024 Publication Circular extrachromosomal DNA in Euglena gracilis under normal and stress conditions. Gumińska N, Hałakuc P, Zakryś B, Milanowski R. Protist. 2024 Publication Mutation in the mitochondrial chaperone TRAP1 leads to autism with more severe symptoms in males. Rydzanicz M, Kuzniewska B, Magnowska M, Wójtowicz T, Stawikowska A, Hojka A, Borsuk E, Meyza K, Gewartowska O, Gruchota J, Miłek J, Wardaszka P, Chojnicka I, Kondrakiewicz L, Dymkowska D, Puścian A, Knapska E, Dziembowski A, Płoski R, Dziembowska M. EMBO Mol Med. 2024 Identification of cardiac-related serum miRNA in patients with type 2 diabetes mellitus and heart failure: Preliminary report. Wrzosek M, Hojka-Osińska A, Klimczak-Tomaniak D, Żarek-Starzewska AK, Dyrla W, Rostek-Bogacka M, Wróblewski M, Kuch M, Kucia M. Adv Clin Exp Med.. 2023 Preprint Multiple Myeloma associated DIS3 mutations drive AID-dependent IgH Translocations. Kulinski TM, Gewartowska O, Mahe M, Kasztelan K, Durys J, Seraphin B, Dziembowski A. bioRxiv. 2023 Preprint mRNA decay can be uncoupled from deadenylation during stress response. Czarnocka-Cieciura A, Turtola M, Tomecki R, Krawczyk P, Mroczek S, Orzeł W, Saha U, Jensen TH, Dziembowski A, Tudek A. bioRxiv. 2023 Measuring the tail: Methods for poly(A) tail profiling. Brouze A, Krawczyk PS, Dziembowski A, Mroczek S. Wiley Interdiscip Rev RNA.. 2023 Publication TENT5 cytoplasmic noncanonical poly(A) polymerases regulate the innate immune response in animals. Liudkovska V, Krawczyk PS, Brouze A, Gumińska N, Wegierski T, Cysewski D, Mackiewicz Z, Ewbank JJ, Drabikowski K, Mroczek S, Dziembowski A. Sci Adv. 2022 Publication Disrupting interaction between miR-132 and Mmp9 3'UTR improves synaptic plasticity and memory in mice. Kuzniewska B, Rejmak K, Nowacka A, Ziółkowska M, Milek J, Magnowska M, Gruchota J, Gewartowska O, Borsuk E, Salamian A, Dziembowski A, Radwanska K, Dziembowska M. Front Mol Neurosci. 2022 Publication A long noncoding RNA promotes parasite differentiation in African trypanosomes. Guegan F, Rajan KS, Bento F, Pinto-Neves D, Sequeira M, Gumińska N, Mroczek S, Dziembowski A, Cohen-Chalamish S, Doniger T, Galili B, Estévez AM, Notredame C, Michaeli S, Figueiredo LM. Sci Adv. 2022 Three-layered control of mRNA poly(A) tail synthesis in Saccharomyces cerevisiae. Turtola M, Manav MC, Kumar A, Tudek A, Mroczek S, Krawczyk PS, Dziembowski A, Schmid M, Passmore LA, Casañal A, Jensen TH. Genes Dev.. 2021 The TUTase URT1 connects decapping activators and prevents the accumulation of excessively deadenylated mRNAs to avoid siRNA biogenesis. Scheer H, de Almeida C, Ferrier E, Simonnot Q, Poirier L, Pflieger D, Sement FM, Koechler S, Piermaria C, Krawczyk P, Mroczek S, Chicher J, Kuhn L, Dziembowski A, Hammann P, Zuber H, Gagliardi D. Nat Commun.. 2021 Global view on the metabolism of RNA poly(A) tails in yeast Saccharomyces cerevisiae. Tudek A, Krawczyk PS, Mroczek S, Tomecki R, Turtola M, Matylla-Kulińska K, Jensen TH, Dziembowski A. Nat Commun. . 2021 Cytoplasmic polyadenylation by TENT5A is required for proper bone formation. Gewartowska O, Aranaz-Novaliches G, Krawczyk PS, Mroczek S, Kusio-Kobiałka M, Tarkowski B, Spoutil F, Benada O, Kofroňová O, Szwedziak P, Cysewski D, Gruchota J, Szpila M, Chlebowski A, Sedlacek R, Prochazka J, Dziembowski A. Cell Rep.. 2021