2001

Polyphyletic evolution of type II restriction enzymes revisited: two independent sources of second-hand folds revealed Bujnicki JM, Radlinska M, Rychlewski L Trends Biochem Sci. 2001 Cloning and characterization of M.LmoA118I, a novel DNA:m4C methyltransferase from the Listeria monocytogenes phage A118, a close homolog of M.NgoMXV Bujnicki JM, Radlinska M Acta Microbiol Pol. 2001 mRNA:guanine-N7 cap methyltransferases: identification of novel members of the family, evolutionary analysis, homology modeling, and analysis of sequence-structure-function relationships Bujnicki JM, Feder M, Radlinska M, Rychlewski L BMC Bioinformatics. 2001 LiveBench-2: large-scale automated evaluation of protein structure prediction servers. Bujnicki JM, Elofsson A, Fischer D, Rychlewski L Proteins. 2001 LiveBench-1: continuous benchmarking of protein structure prediction servers Bujnicki JM, Elofsson A, Fischer D, Rychlewski L Protein Sci. 2001 Structure prediction meta server Bujnicki JM, Elofsson A, Fischer D, Rychlewski L Bioinformatics. 2001 A model of structure and action of Sau3AI restriction endonuclease that comprises two MutH-like endonuclease domains within a single polypeptide. Bujnicki JM Acta Microbiol Pol. 2001 Understanding the evolution of restriction-modification systems: clues from sequence and structure comparisons. Bujnicki JM Acta Biochim Pol. 2001 In silico analysis of the tRNA:m1A58 methyltransferase family: homology-based fold prediction and identification of new members from Eubacteria and Archaea Bujnicki JM FEBS Lett. 2001 Publication Co-chaperones Bag-1, Hop and Hsp40 regulate Hsc70 and Hsp90 interactions with wild-type or mutant p53. King FW, Wawrzynow A, Höhfeld J, Zylicz M. EMBO J. 2001 Types and localisation of p53 gene mutations: a report on 332 non-small cell lung cancer patients. Jassem E, Nikliński J, Rosell R, Niklińska W, Jakóbkiewicz J, Monzo M, Chyczewski L, Kobierska G, Skokowski J, Zylicz M, Jassem J Lung Cancer. 2001 DjlA is a third DnaK co-chaperone of Escherichia coli, and DjlA-mediated induction of colanic acid capsule requires DjlA-DnaK interaction. Genevaux P, Wawrzynow A, Zylicz M, Georgopoulos C, Kelley WL J Biol Chem. 2001 Publication Multitemperature single-strand conformation polymorphism. Kaczanowski R, Trzeciak L, Kucharczyk K Electrophoresis. 2001 Publication Insights into the function of Hsp70 chaperones. Zylicz M, Wawrzynow A. IUBMB Life. 2001 Publication Hsp70 interactions with the p53 tumour suppressor protein. Zylicz M, King FW, Wawrzynow A. EMBO J. 2001 DjlA is a third DnaK co-chaperone of Escherichia coli, and DjlA-mediated induction of colanic acid capsule requires DjlA-DnaK interaction. Genevaux P, Wawrzynow A, Zylicz M, Georgopoulos C, Kelley WL J Biol Chem. 2001 Publication Structure-function analysis of the zinc-binding region of the Clpx molecular chaperone. Banecki B, Wawrzynow A, Puzewicz J, Georgopoulos C, Zylicz M. J Biol Chem. 2001

2000

Characterization of the interaction of calcyclin (S100A6) and calcyclin-binding protein. Nowotny M, Bhattacharya S, Filipek A, Krezel AM, Chazin W, Kuznicki J. J Biol Chem.. 2000 Calcyclin (S100A6) binding protein (CacyBP) is highly expressed in brain neurons. Jastrzebska B, Filipek A, Nowicka D, Kaczmarek L, Kuznicki J. J Histochem Cytochem.. 2000 Upstream stimulatory factor is involved in the regulation of the human calcyclin (S100A6) gene. Leśniak W, Jezierska A, Kuźnicki J. Biochim Biophys Acta.. 2000 Regulation of cell specific expression of calcyclin (S100A6) in nerve cells and other tissues. Leśniak W, Swart GW, Bloemers HP, Kuźnicki J. Acta Neurobiol Exp (Wars). . 2000 Cloning - the crossroads of biology and culture Zekanowski C Gemellological Review. 2000 Polish Centenarians Program “PolStu99” – search for longevity promoting factors (in Polish) Mossakowska M, Puzianowska-Kuznicka M, Barcikowska M, Chiron-Jouan S, Czyzewski K, Derejczyk J, Franceschi C, Gabryelewicz T, Galus K, Grodzicki T, Gross R, Klich-Raczka A, Luczywek E, Passeri G, Pfeffer A, Pruszynski J, Radziszewska E, Sikora E, Sosnowski M, Styczynska M, Wasiak B, Wieczorowska-Tobis K, Zyczkowska J, Kuznicki J Gerontologia. 2000 Prediction of a common fold for all four subunits of the yeast tRNA splicing endonuclease: implications for the evolution of the EndA/Sen family. Bujnicki JM, Rychlewski L FEBS Lett. 2000 Prediction of a novel RNA 2'-O-ribose methyltransferase subfamily encoded by the Escherichia coli YgdE open reading frame and its orthologs Bujnicki JM, Rychlewski L Acta Microbiol Pol. 2000 Atomic model of the 5-methylcytosine-specific restriction enzyme McrA reveals an atypical zinc finger and structural similarity to betabetaalphaMe endonucleases Bujnicki JM, Radlinska M, Rychlewski L Mol Microbiol. 2000 Sequence, structural, and evolutionary analysis of prokaryotic ribosomal protein L11 methyltransferases. Bujnicki JM Acta Microbiol Pol. 2000 Phylogenomic analysis of 16S rRNA:(guanine-N2) methyltransferases suggests new family members and reveals highly conserved motifs and a domain structure similar to other nucleic acid amino-methyltransferases. Bujnicki JM FASEB J. 2000