2025

Publication Computational analysis of congenital heart disease associated SNPs: unveiling their impact on the gene regulatory system. Vashisht S, Parisi C, Winata CL. BMC Genomics. 2025 Publication Anti-HBs Positivity Related to Past HBV Infection and Vaccination in Older Adults in Polish Population-Cohort-Based Study. Zięba K, Jagiełło K, Musialik J, Wierucki Ł, Hajduk A, Mossakowska M, Chudek J. Vaccines (Basel). 2025 Publication Single-cell and spatial transcriptomics illuminate bat immunity and barrier tissue evolution. Levinger R, Tussia-Cohen D, Friedman S, Lender Y, Nissan Y, Fraimovitch E, Gavriel Y, Tearle J, Kolodziejczyk AA, Moon KM, Gomes T, Kunowska N, Weinberg M, Donati G, Foster LJ, James KR, Yovel Y, Hagai T. Mol Biol Evol. 2025 Publication Effects of genetic ablation and pharmacological inhibition of HuR on gene expression, iron metabolism, and hormone levels. Idlin N, Krishnamoorthy S, Wolczyk M, Fakhri M, Lechowski M, Stec N, Milek J, Mandal PK, Cendrowski J, Spanos C, Dziembowska M, Mleczko-Sanecka K, Rappsilber J, Michlewski G. BMC Biol. 2025 Preprint A novel MAPK1 variant in a family with complex psychiatric and neurodegenerative clinical phenotype. Dubey AA, Rydzanicz M, Barczak A, Szulc NA, Surpeta B, Kuzniewska B, Gaweda-Walerych K, Wężyk M, Berdyński M, Fichna JP, Kostrzewa G, Gasperowicz P, Stępniak I, Szymańska K, Szczałuba K, Brezovsky J, Dziembowska M, Pokrzywa W, Ploski R. Research Square. 2025 Publication Health status correlates of malnutrition diagnosed based on the GLIM criteria in older Polish adults-Results of the PolSenior 2 study. Kaluźniak-Szymanowska A, Deskur-Śmielecka E, Krzymińska-Siemaszko R, Styszyński A, Tobis S, Lewandowicz M, Chudek J, Kostka T, Mossakowska M, Piotrowicz K, Kujawska-Danecka H, Wieczorowska-Tobis K. PLoS One. 2025 Publication Comprehensive analysis of poly(A) tails in mouse testes and ovaries using Nanopore Direct RNA Sequencing. Czarnocka-Cieciura A, Brouze M, Gumińska N, Mroczek S, Gewartowska O, Krawczyk PS, Dziembowski A. Sci Data. 2025 Publication Protocol for microinjection of rapamycin into the zebrafish habenula. Doszyn O, Dulski T, Zmorzynska J. STAR Protoc. 2025 Publication DEGRADATOR: A Gaming Expedition Into Targeted Protein Degradation Therapies. Szulc NA, Olchowik A, Jaszczak P, Janiak B, Cup M, Tomaszewski J, Pokrzywa W. J Chem Educ. 2025 Publication 5′ terminal nucleotide determines the immunogenicity of IVT RNAs. Wolczyk M, Szymanski J, Trus I, Naz Z, Tame T, Bolembach A, Choudhury NR, Kasztelan K, Rappsilber J, Dziembowski A, Michlewski G. Nucleic Acids Res. 2025 Publication RNA-Puzzles Round V: blind predictions of 23 RNA structures. Bu F, Adam Y, Adamiak RW, Antczak M, de Aquino BRH, Badepally NG, Batey RT, Baulin EF, Boinski P, Boniecki MJ, Bujnicki JM, Carpenter KA, Chacon J, Chen SJ, Chiu W, Cordero P, Das NK, Das R, Dawson WK, DiMaio F, Ding F, Dock-Bregeon AC, Dokholyan NV, Dror RO, Dunin-Horkawicz S, Eismann S, Ennifar E, Esmaeeli R, Farsani MA, Ferré-D'Amaré AR, Geniesse C, Ghanim GE, Guzman HV, Hood IV, Huang L, Jain DS, Jaryani F, Jin L, Joshi A, Karelina M, Kieft JS, Kladwang W, Kmiecik S, Koirala D, Kollmann M, Kretsch RC, Kurciński M, Li J, Li S, Magnus M, Masquida B, Moafinejad SN, Mondal A, Mukherjee S, Nguyen THD, Nikolaev G, Nithin C, Nye G, Pandaranadar Jeyeram IPN, Perez A, Pham P, Piccirilli JA, Pilla SP, Pluta R, Poblete S, Ponce-Salvatierra A, Popenda M, Popenda L, Pucci F, Rangan R, Ray A, Ren A, Sarzynska J, Sha CM, Stefaniak F, Su Z, Suddala KC, Szachniuk M, Townshend R, Trachman RJ 3rd, Wang J, Wang W, Watkins A, Wirecki TK, Xiao Y, Xiong P, Xiong Y, Yang J, Yesselman JD, Zhang J, Zhang Y, Zhang Z, Zhou Y, Zok T, Zhang D, Zhang S, Żyła A, Westhof E, Miao Z. Nat Methods. 2025 Publication Data storage based on the absence of nucleotides using a bacteriophage abortive infection system reverse transcriptase. Bajc G, Pavlin A, Figiel M, Zajko W, Nowotny M, Butala M. Lab Chip. 2025 Publication Zebrafish in-vivo study reveals deleterious activity of human TBC1D24 genetic variants linked with autosomal dominant hearing loss. Sarosiak A, Jędrychowska J, Oziębło D, Gan NS, Bałdyga N, Leja ML, Węgierski T, Cruz IA, Raible DW, Skarżyński H, Tylzanowski P, Korzh V, Ołdak M. Biochim Biophys Acta Mol Basis Dis. 2025 Publication CD71+ erythroid cells promote multiple myeloma progression and impair anti-bacterial immune response. Czubak K, Grzywa TM, Sidor-Dzitkowska K, Pilch Z, Bielak K, Hoser G, Gewartowska O, Malecka-Gieldowska M, Barankiewicz J, Garbicz F, Ciepiela O, Juszczynski P, Owczarek A, Wegrzynowicz M, Skirecki T, Golab J, Nowis D. Br J Haematol. 2025 Publication Sci-ModoM: a quantitative database of transcriptome-wide high-throughput RNA modification sites. Boileau E, Wilhelmi H, Busch A, Cappannini A, Hildebrand A, Bujnicki JM, Dieterich C. Nucleic Acids Res . 2025 Publication Zygotic activin a is dispensable for the mouse preimplantation embryo development and for the derivation and pluripotency of embryonic stem cells. Winek E, Wolińska-Nizioł L, Szczepańska K, Szpakowska A, Gewartowska O, Wysocka I, Grzesiak M, Suwińska A. Biol Reprod. 2025 Publication How the technologies behind self-driving cars, social networks, ChatGPT, and DALL-E2 are changing structural biology. Bochtler M. Bioessays. 2025 Publication NAIRDB: a database of Fourier transform infrared (FTIR) data for nucleic acids. Balduzzi E, Geinguenaud F, Sordyl D, Maiti S, Farsani MA, Nikolaev G, Arluison V, Bujnicki JM. Nucleic Acids Res. 2025 Publication Ecological interactions in glacier environments: a review of studies on a model Alpine glacier. Crosta A, Valle B, Caccianiga M, Gobbi M, Ficetola FG, Pittino F, Franzetti A, Azzoni RS, Lencioni V, Senese A, Corlatti L, Buda J, Poniecka E, Novotná Jaroměřská T, Zawierucha K, Ambrosini R. Biol Rev. 2025 Publication Water Migration through Enzyme Tunnels Is Sensitive to the Choice of Explicit Water Model. Thirunavukarasu AS, Szleper K, Tanriver G, Marchlewski I, Mitusinska K, Gora A, Brezovsky J. J Chem Inf Model. 2025

2024

Publication Factors Affecting Activity Patterns of the Whiskered Bat Myotis mystacinus (Kuhl, 1817) (Chiroptera: Vespertilionidae) in the Western Carpathians, Poland Kurek K, Jędzrzejewsja B, Gewartowska O, Tołkacz K, Mysłajek RW. Acta Zool Bulg. 2024 Publication Role of Non-Canonical Stacking Interactions of Heterocyclic RNA Bases in Ribosome Function. Metelev VG, Baulin EF, Bogdanov AA. Biochemistry (Mosc). 2024 Publication Prevalence of hypercholesterolemia in the elderly and very elderly members of the Polish population: results of a national cross‑sectional representative survey. Chlebus K, Zdrojewski T, Jagiełło K, Mossakowska M, Chudek J, Więcek A, Grodzicki T. Pol Arch Intern Med. 2024 Publication Impact of water models on the structure and dynamics of enzyme tunnels. Sethi A, Agrawal N, Brezovsky J. Comput Struct Biotechnol J. 2024 Publication Worldwide trends in diabetes prevalence and treatment from 1990 to 2022: a pooled analysis of 1108 population-representative studies with 141 million participants. NCD Risk Factor Collaboration (NCD-RisC) within Mossakowska M. Lancet. 2024 Publication Proteomic Analyses Reveal the Role of Alpha-2-Macroglobulin in Canine Osteosarcoma Cell Migration. Wilk SS, Michalak K, Owczarek EP, Winiarczyk S, Zabielska-Koczywąs KA. Int J Mol Sci. 2024 Publication NFκB and JNK pathways mediate metabolic adaptation upon ESCRT‑I deficiency. Cendrowski J, Wrobel M, Mazur M, Jary B, Maurya R, Wang S, Korostynski M, Dziewulska A, Rohm M, Kuropka P, Pudelko‑Malik N, Mlynarz P, Dobrzyn A, Zeigerer A, Miaczynska M. Cell Mol Life Sci. 2024 Publication ATPase Valosin-Containing Protein (VCP) Is Involved During the Replication and Egress of Sialodacryoadenitis Virus (SDAV) in Neurons. Bartak M, Krahel WD, Chodkowski M, Grel H, Walczak J, Pallepati A, Komorowski M, Cymerys J. Int J Mol Sci. 2024 Publication Endogenous ZAP is associated with altered Zika virus infection phenotype. Le NPK, Singh PP, Sabir AJ, Trus I, Karniychuk U. Virol J. 2024 Publication Generation of four human induced pluripotent stem cell lines derived from patients with MPAN, subtype of NBIA, carrying the c.204_214del11 mutation in the C19orf12 gene. Krogulec E, Dobosz AM, Liszewska E, Majchrowicz L, Dobrzyń A. Stem Cell Res. 2024