2012

Related bifunctional restriction endonuclease-methyltransferase triplets: TspDTI, Tth111II/TthHB27I and TsoI with distinct specificities Zylicz-Stachula A, Zolnierkiewicz O, Lubys A, Ramanauskaite D, Mitkaite G, Bujnicki JM, Skowron P BMC Mol Biol. 2012 The open reading frame TTC1157 of Thermus thermophilus HB27 encodes the methyltransferase forming N2-methylguanosine at position 6 in tRNA Roovers M, Oudjama Y, Fislage M, Bujnicki JM, Versées W, Droogmans L RNA. 2012 Crohn's Disease Risk Alleles on the NOD2 Locus Have Been Maintained by Natural Selection on Standing Variation Nakagome S, Mano S, Kozlowski L, Bujnicki JM, Shibata H, Fukumaki Y, Kidd JR, Kidd KK, Kawamura S, Oota H Mol Biol Evol. 2012 Computational methods for prediction of protein-RNA interactions Puton T, Kozlowski L, Tuszynska I, Rother K, Bujnicki JM J Struct Biol. 2012 A toolbox for developing bioinformatics software Rother K, Potrzebowski W, Puton T, Rother M, Wywial E, Bujnicki JM Brief Bioinform. 2012 The new faces of endocytosis in signaling Hupalowska A, Miaczynska M Traffic. 2012 Structure and operation of the DNA-translocating type I DNA restriction enzymes Kennaway CK, Taylor JE, Song CF, Potrzebowski W, Nicholson W, White JH, Swiderska A,Obarska-Kosinska A, Callow P, Cooper LP, Roberts GA, Artero JB,Bujnicki JM, Trinick J, Kneale GG, Dryden DT Genes Dev. 2012 MetalionRNA: computational predictor of metal-binding sites in RNA structures Philips A, Milanowska K, Lach G, Boniecki M, Rother K, Bujnicki JM Bioinformatics. 2012 The mechanics of the cellular division or how to split a sphere into two? Tinevez JY, Salbreux G, Paluch E Med Sci (Paris). 2012 Action of Molecular Switches in GPCRs - Theoretical and Experimental Studies Trzaskowski B, Latek D, Yuan S, Ghoshdastider U, Debinski A, Filipek S Curr Med Chem. 2012 Modeling and simulation of cellular functions Paluch E, El-Samad H Mol Biol Cell. 2012 Conformational altered p53 as an early marker of oxidative stress in Alzheimer's disease Buizza L, Cenini G, Lanni C, Ferrari-Toninelli G, Prandelli C, Govoni S, Buoso E, Racchi M, Barcikowska M, Styczynska M, Szybinska A, Butterfield DA, Memo M, Uberti D PLoS One. 2012 Mutations in radial spoke head genes and ultrastructural cilia defects in East-European cohort of primary ciliary dyskinesia patients Ziętkiewicz E, Bukowy-Bieryłło Z, Voelkel K, Klimek B, Dmeńska H, Pogorzelski A, Sulikowska-Rowińska A, Rutkiewicz E, Witt M PLoS One. 2012 Developmental plasticity of the dendritic compartment: focus on the cytoskeleton Urbanska M, Swiech L, Jaworski J Adv Exp Med Biol. 2012 DNA methylation pattern is altered in childhood T-cell acute lymphoblastic leukemia patients as compared with normal thymic subsets: insights into CpG island methylator phenotype in T-ALL Kraszewska MD, Dawidowska M, Kosmalska M, Sędek L, Grzeszczak W, Szczepański T, Witt M Leukemia. 2012 T-cell acute lymphoblastic leukaemia: recent molecular biology findings Kraszewska MD, Dawidowska M, Szczepanski T, Witt M Br J Haematol. 2012 Immunoglobulin/T-cell receptor gene rearrangements in the diagnostic paradigm of pediatric T-cell acute lymphoblastic leukemia patients Kraszewska MD, Dawidowska M, Kosmalska M, Sędek L, Grzeszczak W, Szczepański T, Witt M Leukemia & Lymphoma. 2012 Current genetic methodologies in the identification of disaster victims and in forensic analysis Ziętkiewicz E, Witt M, Daca P, Zebracka-Gala J, Goniewicz M, Jarząb B, Witt M J Appl Genet.. 2012 Lack of Pur-alpha alters postnatal brain development and causes megalencephaly Hokkanen S, Feldmann HM, Ding H, Jung CK, Bojarski L, Renner-Müller I, Schüller U, Kretzschmar H, Wolf E, Herms J Hum Mol Genet.. 2012

2011

Program badawczy PolSenior – cele i metoda Błędowski P, Mossakowska M, Szybalska A Zeszyty Naukowe Ochrony Zdrowia. Zdrowie Publiczne i Zarządzanie. 2011 Virtual screening strategies in drug design - methods and applications Bielska E, Lucas X, Czerwoniec A, Kasprzak JM, Kaminska KH, Bujnicki JM BioTechnologia. 2011 Publication Modeling of ligand binding to G protein coupled receptors: cannabinoid CB(1), CB (2) and adrenergic β (2)AR. Latek D, Kolinski M, Ghoshdastider U, Debinski A, Bombolewski R, Plazinska A, Jozwiak K, Filipek S. Materials Today. 2011 A high density consensus map of rye (Secale cereale L.) based on DArT markers Milczarski P, Bolibok-Brągoszewska H, Myśków B, Stojałowski S, Heller-Uszyńska K, Góralska M, Brągoszewski P, Uszyński G, Kilian A, Rakoczy-Trojanowska M PLoS One. 2011 STAT1 as a novel therapeutical target in pro-atherogenic signal integration of IFNg, TLR4 and IL-6 in vascular disease Sikorski K, Czerwoniec A, Bujnicki JM, Wesoly J, Bluyssen HAR Cytokine Growth Factor Rev.. 2011 RNA tertiary structure prediction with ModeRNA Rother M, Rother K, Puton T, Bujnicki JM Brief Bioinform. 2011 Databases and bioinformatics tools for the study of DNA repair Milanowska K, Rother K, Bujnicki JM Mol Biol Int. 2011 Effect of substrate features and mutagenesis of active site tyrosine residues on the reaction course catalysed by Trypanosoma brucei sterol C-24-methyltransferase Liu J, Ganapathy K, Wywial E, Bujnicki JM, Nwogwugwu CA, Nes WD Biochem J. 2011 Identification and modeling of a phosphatase-like domain in a tRNA 2'-O-ribosyl phosphate transferase Rit1p Czerwoniec A, Bujnicki JM Cell Cycle. 2011 RNAcentral: A vision for an international database of RNA sequences Bateman A, Agrawal S, Birney E, Bruford EA, Bujnicki JM, Cochrane G, Cole JR, Dinger ME, Enright AJ, Gardner PP, Gautheret D, Griffiths-Jones S, Harrow J, Herrero J, Holmes IH, Huang HD, Kelly KA, Kersey P, Kozomara A, Lowe TM, Marz M, Moxon S, Pruitt KD, Samuelsson T, Stadler PF, Vilella AJ, Vogel JH, Williams KP, Wright MW, Zwieb C RNA. 2011 Store-operated calcium entry modulates neuronal network activity in a model of chronic epilepsy Steinbeck JA, Henke N, Opatz J, Gruszczynska-Biegala J, Schneider L, Theiss S, Hamacher N, Steinfarz B, Golz S, Brüstle O, Kuznicki J, Methner A Exp Neurol.. 2011