2024

Publication The effect of infection with the entomopathogenic fungus Conidiobolus coronatus (Entomopthorales) on eighteen cytokine-like proteins in Galleria mellonella (Lepidoptera) larvae. Wrońska AK, Kaczmarek A, Sobich J, Boguś MI. Front Immunol. 2024 Publication Autophagy initiation triggers p150Glued-AP-2β interaction on the lysosomes and facilitates their transport. Tempes A, Bogusz K, Brzozowska A, Weslawski J, Macias M, Tkaczyk O, Orzoł K, Lew A, Calka-Kresa M, Bernas T, Szczepankiewicz AA, Mlostek M, Kumari S, Liszewska E, Machnicka K, Bakun M, Rubel T, Malik AR, Jaworski J. Cell Mol Life Sci. 2024 Publication SimRNAweb v2.0: a web server for RNA folding simulations and 3D structure modeling, with optional restraints and enhanced analysis of folding trajectories. Moafinejad SN, de Aquino BRH, Boniecki MJ, Jeyeram IPNP, Nikolaev G, Magnus M, Farsani MA, Badepally NG, Wirecki TK, Stefaniak F, Bujnicki JM. Nucleic Acids Res. 2024 Publication Sex-specific relationships of inflammatory biomarkers with blood pressure in older adults. Sulicka-Grodzicka J, Wizner B, Zdrojewski T, Mossakowska M, Puzianowska-Kuźnicka M, Chudek J, Więcek A, Korkosz M, Caiazzo E, Maffia P, Siedlinski M, Messerli FH, Guzik TJ. Geroscience. 2024 Publication Factors defining developmental competence of bovine oocytes collected for in vitro embryo production. Pytel AT, Żyżyńska-Galeńska K, Gajewski Z, Papis K. Biol Reprod. 2024 Publication Characterization of winged helix domain fusion endonucleases as N6-methyladenine-dependent type IV restriction systems. Helbrecht I, Heiter D, Yang W, Vincze T, Hanneman A, Lutz T, Ettwiller L, Bochtler M, Xu SY. Front Microbiol. 2024 Publication E3 ubiquitin ligase RNF2 protects polymerase ι from destabilization. Fedorowicz M, Halas A, Macias M, Sledziewska-Gojska E, Woodgate R, McIntyre J. Biochim Biophys Acta Mol Cell Res. 2024 Publication Engineering of chimeric enzymes with expanded tolerance to ionic strength. Mitkowski P, Jagielska E, Sabała I. Microbiol Spectr. 2024 Publication Autophagy at the postsynapse begins with Rab11 and does not end with dendritic spine pruning. Janusz-Kaminska A, Jaworski J. Autophagy Reports. 2024 Publication ARTEMIS: a method for topology-independent superposition of RNA 3D structures and structure-based sequence alignment. Bohdan DR, Bujnicki JM, Baulin EF. Nucleic Acids Res. 2024 Publication Never-ending story of Brachyury: From short-tailed mice to tailless primates. Korzh V. Cells Dev. 2024 Publication Structure-functional characterization of Lactococcus AbiA phage defense system. Gapińska M, Zajko W, Skowronek K, Figiel M, Krawczyk PS, Egorov AA, Dziembowski A, Johansson MJO, Nowotny M. Nucleic Acids Res. 2024 Publication Circular extrachromosomal DNA in Euglena gracilis under normal and stress conditions. Gumińska N, Hałakuc P, Zakryś B, Milanowski R. Protist. 2024 Publication AI is a viable alternative to high throughput screening: a 318-target study. Participants of the Atomwise AIMS Program, including IIMCB researchers Stec N, Zhu S and Michlewski G. Sci Rep. 2024 Publication Targeting the EGFR pathway: An alternative strategy for the treatment of tuberous sclerosis complex? Schachenhofer J, Gruber VE, Fehrer SV, Haider C, Glatter S, Liszewska E, Höftberger R, Aronica E, Rössler K, Jaworski J, Scholl T, Feucht M. Neuropathol Appl Neurobiol. 2024 Publication Diving into the zebrafish brain: exploring neuroscience frontiers with genetic tools, imaging techniques, and behavioral insights. Doszyn O, Dulski T, Zmorzynska J. Front Mol Neurosci. 2024 Publication Pheromone-based communication influences the production of somatic extracellular vesicles in C. elegans Szczepańska A, Olek K, Kołodziejska K, Yu J, Ibrahim AT, Adamkiewicz L, Schroeder FC, Pokrzywa W, Turek M. Nat Commun. 2024 Publication RrA, an enzyme from Rhodospirillum rubrum, is a prototype of a new family of short-chain L-asparaginases. Di Zhang D, Czapinska H, Bochtler M, Wlodawer A, Lubkowski J. Protein Sci. 2024 Publication Despite the odds: formation of the SARS-CoV-2 methylation complex. Matsuda A, Plewka J, Rawski M, Mourão A, Zajko W, Siebenmorgen T, Kresik L, Lis K, Jones AN, Pachota M, Karim A, Hartman K, Nirwal S, Sonani R, Chykunova Y, Minia I, Mak P, Landthaler M, Nowotny M, Dubin G, Sattler M, Suder P, Popowicz GM, Pyrć K, Czarna A. Nucleic Acids Res. 2024 Publication Worldwide trends in underweight and obesity from 1990 to 2022: a pooled analysis of 3663 populationrepresentative studies with 222 million children, adolescents, and adults. NCD Risk Factor Collaboration (NCD-RisC) within Mossakowska M. Lancet. 2024 Publication Drug repurposing screen to identify inhibitors of the RNA polymerase (nsp12) and helicase (nsp13) from SARS-CoV-2 replication and transcription complex. Kuzikov M, Reinshagen J, Wycisk K, Corona A, Esposito F, Malune P, Manelfi C, Iaconis D, Beccari A, Tramontano E, Nowotny M, Windshügel B, Gribbon P, Zaliani A. Virus Res.. 2024 Publication Mutant analysis of Kcng4b reveals how the different functional states of the voltage-gated potassium channel regulate ear development. Jędrychowska J, Vardanyan V, Wieczor M, Marciniak A, Czub J, Amini R, Jain R, Shen H, Choi H, Kuznicki J, Korzh V. Dev Biol. . 2024 Publication Cryo-EM structure of rotavirus B NSP2 reveals its unique tertiary architecture. Chamera S, Wycisk K, Czarnocki-Cieciura M, Nowotny M. J Virol. 2024 Publication Structure-Based Discovery of High-Affinity Small Molecule Ligands and Development of Tool Probes to Study the Role of Chitinase-3-Like Protein 1. Czestkowski W, Krzemiński Ł, Piotrowicz MC, Mazur M, Pluta E, Andryianau G, Koralewski R, Matyszewski K, Olejniczak S, Kowalski M, Lisiecka K, Kozieł R, Piwowar K, Papiernik D, Nowotny M, Napiórkowska-Gromadzka A, Nowak E, Niedziałek D, Wieczorek G, Siwińska A, Rejczak T, Jędrzejczak K, Mulewski K, Olczak J, Zasłona Z, Gołębiowski A, Drzewicka K, Bartoszewicz A. J Med Chem. 2024 Publication Conserved structures and dynamics in 5'-proximal regions of Betacoronavirus RNA genomes. de Moura TR, Purta E, Bernat A, Martín-Cuevas EM, Kurkowska M, Baulin EF, Mukherjee S, Nowak J, Biela AP, Rawski M, Glatt S, Moreno-Herrero F, Bujnicki JM. Nucleic Acids Res. 2024 Publication X-rays, electrons, and neutrons as probes of atomic matter. Bochtler M. Structure. 2024 Publication Discovery of a trefoil knot in the RydC RNA: Challenging previous notions of RNA topology. Niemyska W, Mukherjee S, Gren BA, Niewieczerzal S, Bujnicki JM, Sulkowska JI. J Mol Biol.. 2024 Publication MODOMICS: a database of RNA modifications and related information. 2023 update. Cappannini A, Ray A, Purta E, Mukherjee S, Boccaletto P, Moafinejad SN, Lechner A, Barchet C, Klaholz BP, Stefaniak F, Bujnicki JM. Nucleic Acids Res. . 2024 Publication Iron-triggered signaling via ETS1 and the p38/JNK MAPK pathway regulates Bmp6 expression. Zurawska G, Jończy A, Niklewicz M, Sas Z, Rumieńczyk I, Kulecka M, Piwocka K, Rygiel TP, Mikula M, Mleczko-Sanecka K. Am J Hematol. 2024 Publication Rab11 regulates autophagy at dendritic spines in an mTOR- and NMDA-dependent manner. Janusz-Kaminska A, Brzozowska A, Tempes A, Urbanska M, Blazejczyk M, Miłek J, Kuzniewska B, Zeng J, Wesławski J, Kisielewska K, Bassell GJ, Jaworski J. Mol Biol Cell.. 2024